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mathematician (doctoral student). Karlsson’s group is part of the Division of Optimization and Systems Theory within the Department of Mathematics at KTH. Currently, a large focus of the group is to develop
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an individual research project, you will be responsible for setting up and evaluating data analysis, implementing models and networks, define optimal scientific protocols, and write scientific articles and
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physiology of tumors, providing a platform to identify and optimize therapeutic candidates. Our group specializes in developing technologies to assess the multicellular environment within three-dimensional
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Networks. The project encompasses several challenges in the gene regulatory network (GRN) field, from simulating realistic networks and data to accurate inference of GRNs from noisy gene expression data
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employed to translate spatial gene expression profiles from healthy tissues to disease states, and vice versa. This capability will allow researchers to simulate the effects of drug treatments on spatially
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-dimensional statistics, and optimization. Documented experience in working with biological data, especially genomics, or other types of high-dimensional data such as imaging. Excellent programming skills in
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interdisciplinary project. The project concerns algorithm design, implementations of algorithms, and simulated and biological data analysis. The student is expected to learn a bit of relevant molecular biology to
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, biophysics Machine learning and generative AI Molecular modeling and molecular dynamics simulations LNP formulation and characterisation including e.g. small angle scattering, microscopy, single particle
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reconstitution to study the replication of positive-sense RNA viruses. This is a vast group of viruses responsible for serious diseases such as Dengue, Chikungunya, TBE and viral myocarditis. To copy their genomes
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dynamics of plasmid copy number in pathogenic bacteria, with a strong focus on infection biology and evolution of antibiotic resistance. The goals for this project are i) to better understand the role