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neural networks Documented experience with image analysis Strong competence in Python programming and Linux/HPC environments Prior experience of virtualization and software development Good social skills
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, e.g git. Experience of Linux/UNIX-terminal. Excellent communication- and collaboration skills. You speak and write English fluently. Meriting Experience of HPC or corresponding computer systems
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). Particular emphasis is placed on HPC-supported computing of sequencing data into assembled transcripts (de novo assembly is a frequent need), and further downstream translation of the ORFs of said transcripts
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of projects could also be included. Work can include, but is not limited to, development of pipelines in Nextflow or Snakemake, scripting in Python and/or R, and running large-scale analyses efficiently in HPC
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written. We place great emphasis on personal suitability. Additional qualifications It is considered advantageous if the candidate has documented experience in: Working with high-performance computing (HPC
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). Particular emphasis is placed on HPC-supported computing of sequencing data into assembled transcripts (de novo assembly is a frequent need), and further downstream translation of the ORFs of said transcripts
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nf-core is essential. The role will involve collaboration with both academics and healthcare professionals and issues of data security are therefore paramount. The Facility has its own HPC cluster, and
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coastal hub. Read more about working at Chalmers and our benefits for employees. AIMLeNS offers: Access to state of the art HPC computing facilities (BerzeLiUs, Alvis) Mentorship for career development
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learning packages (e.g. PyTorch, Keras) Experience with HPC and scientific workflow management tools (e.g. Nextflow, Snakemake) Experience with single-cell data analysis (e.g scanpy, scvi), and/or spatial